Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m28 family peptidase | ALPR1_RS09230 | Not Available | Positive | 2195961 - 2197259 | 48264.8 |
| tonb-dependent receptor | ALPR1_RS09235 | Not Available | Negative | 2197370 - 2197777 | 16073.8 |
| glycoside hydrolase family 9 protein | ALPR1_RS09240 | Not Available | Positive | 2198092 - 2199888 | 68133.5 |
| ph domain-containing protein | ALPR1_RS09245 | Not Available | Positive | 2199959 - 2200489 | 19641.1 |
| pas domain-containing protein | ALPR1_RS09250 | Not Available | Negative | 2200493 - 2201314 | 31845.5 |
| glycosyl hydrolase | ALPR1_RS09255 | Not Available | Negative | 2201405 - 2204179 | 104739.0 |
| l-rhamnose mutarotase | ALPR1_RS09260 | Not Available | Negative | 2204191 - 2204505 | 12278.6 |
| rhamnogalacturonan acetylesterase | ALPR1_RS09265 | Not Available | Negative | 2204509 - 2206026 | 57080.1 |
| vps10 domain-containing protein | ALPR1_RS09270 | Not Available | Positive | 2206246 - 2208972 | 100640.0 |
| sulfatase | ALPR1_RS09275 | Not Available | Negative | 2209064 - 2210461 | 52106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
