Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | ALPR1_RS09180 | Not Available | Positive | 2176862 - 2177890 | 39661.0 |
| tonb-dependent receptor | ALPR1_RS09185 | Not Available | Positive | 2178049 - 2181555 | 128769.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS09190 | Not Available | Positive | 2181573 - 2183114 | 57327.3 |
| vcbs repeat-containing protein | ALPR1_RS09195 | Not Available | Positive | 2183212 - 2186511 | 122456.0 |
| sulfatase-like hydrolase/transferase | ALPR1_RS09200 | Not Available | Positive | 2186514 - 2188463 | 73331.0 |
| family 78 glycoside hydrolase catalytic domain | ALPR1_RS09205 | Not Available | Positive | 2188556 - 2190910 | 90173.1 |
| family 20 glycosylhydrolase | ALPR1_RS09210 | Not Available | Positive | 2192199 - 2194394 | 82725.6 |
| hypothetical protein | ALPR1_RS09215 | Not Available | Positive | 2194661 - 2194933 | 10423.4 |
| mbth family protein | ALPR1_RS09220 | Not Available | Positive | 2195057 - 2195284 | 8912.59 |
| gnat family n-acetyltransferase | ALPR1_RS09225 | Not Available | Positive | 2195386 - 2195838 | 17104.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
