Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS08930 | Not Available | Positive | 2117991 - 2118458 | 16962.3 |
| hypothetical protein | ALPR1_RS08935 | Not Available | Positive | 2118485 - 2119063 | 21978.3 |
| hypothetical protein | ALPR1_RS08940 | Not Available | Positive | 2119060 - 2119902 | 32606.9 |
| leucine-rich repeat domain-containing protein | ALPR1_RS08945 | Not Available | Positive | 2119889 - 2122339 | 92564.4 |
| hypothetical protein | ALPR1_RS08950 | Not Available | Positive | 2122589 - 2124136 | 59774.8 |
| hypothetical protein | ALPR1_RS08955 | Not Available | Positive | 2124133 - 2125686 | 60784.2 |
| four helix bundle protein | ALPR1_RS08960 | Not Available | Negative | 2125972 - 2126340 | 14409.2 |
| winged helix-turn-helix domain-containing protein | ALPR1_RS08965 | Not Available | Positive | 2126453 - 2126959 | 19111.3 |
| abc transporter permease | ALPR1_RS08970 | Not Available | Positive | 2127173 - 2128000 | 31487.5 |
| endonuclease domain-containing protein | ALPR1_RS08975 | Not Available | Positive | 2128353 - 2128724 | 14797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
