Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sufe family protein | ALPR1_RS08630 | Not Available | Negative | 2037737 - 2038168 | 16067.3 |
| cysteine desulfurase | ALPR1_RS08635 | Not Available | Negative | 2038165 - 2039388 | 44859.9 |
| fe-s cluster assembly protein sufd | ALPR1_RS08640 | Not Available | Negative | 2039398 - 2040666 | 46767.0 |
| fe-s cluster assembly atpase sufc | ALPR1_RS08645 | Not Available | Negative | 2040689 - 2041453 | 28100.8 |
| fe-s cluster assembly protein sufb | ALPR1_RS08650 | Not Available | Negative | 2041494 - 2042939 | 53746.4 |
| lrp/asnc ligand binding domain-containing protein | ALPR1_RS08655 | Not Available | Negative | 2043180 - 2043653 | 17916.7 |
| hypothetical protein | ALPR1_RS20275 | Not Available | Positive | 2044029 - 2044565 | 20332.5 |
| m14 family metallopeptidase | ALPR1_RS08665 | Not Available | Positive | 2044655 - 2046568 | 72803.9 |
| alpha/beta hydrolase family protein | ALPR1_RS08670 | Not Available | Positive | 2046581 - 2049394 | 106381.0 |
| thymidylate synthase | ALPR1_RS08675 | Not Available | Negative | 2049537 - 2050331 | 30430.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
