Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | ALPR1_RS08580 | Not Available | Negative | 2028355 - 2028930 | 22225.6 |
| oxygen-dependent coproporphyrinogen oxidase | ALPR1_RS08585 | Not Available | Negative | 2028927 - 2029838 | 34956.4 |
| bama/tama family outer membrane protein | ALPR1_RS08590 | Not Available | Negative | 2029847 - 2032261 | 92791.1 |
| trmh family rna methyltransferase | ALPR1_RS08595 | Not Available | Positive | 2032281 - 2033030 | 27954.5 |
| bile acid:sodium symporter family protein | ALPR1_RS08600 | Not Available | Positive | 2033027 - 2034022 | 36113.9 |
| hypothetical protein | ALPR1_RS08605 | Not Available | Positive | 2034104 - 2034982 | 32091.9 |
| acyl-coa-binding protein | ALPR1_RS08610 | Not Available | Negative | 2035039 - 2035299 | 9775.55 |
| citrate synthase | ALPR1_RS08615 | Not Available | Negative | 2035418 - 2036704 | 47818.0 |
| brxa/brxb family bacilliredoxin | ALPR1_RS08620 | Not Available | Negative | 2036944 - 2037369 | 15447.5 |
| duf59 domain-containing protein | ALPR1_RS08625 | Not Available | Negative | 2037396 - 2037734 | 12661.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
