Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside hydrolase-like domain-containing protein | ALPR1_RS08480 | Not Available | Negative | 2005584 - 2006879 | 48776.9 |
| helix-turn-helix domain-containing protein | ALPR1_RS08485 | Not Available | Positive | 2007003 - 2007845 | 32557.1 |
| Trna-ser | Not Available | Not Available | Positive | 2008013 - 2008104 | Not Available |
| hypothetical protein | ALPR1_RS08495 | Not Available | Positive | 2008551 - 2008805 | 9533.34 |
| hypothetical protein | ALPR1_RS08500 | Not Available | Positive | 2009071 - 2010321 | 47554.5 |
| hypothetical protein | ALPR1_RS20265 | Not Available | Negative | 2010318 - 2011847 | 57583.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | ALPR1_RS08510 | Not Available | Negative | 2011886 - 2013103 | 46163.8 |
| o-succinylbenzoate synthase | ALPR1_RS08515 | Not Available | Positive | 2013178 - 2014248 | 40086.6 |
| lactonase family protein | ALPR1_RS08520 | Not Available | Negative | 2014245 - 2015384 | 41428.7 |
| phosphoenolpyruvate carboxylase | ALPR1_RS08525 | Not Available | Positive | 2015558 - 2018092 | 96739.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
