Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bata domain-containing protein | ALPR1_RS20260 | Not Available | Positive | 1955958 - 1957127 | 44303.7 |
| hypothetical protein | ALPR1_RS08330 | Not Available | Positive | 1957124 - 1959304 | 82767.8 |
| hypothetical protein | ALPR1_RS08335 | Not Available | Positive | 1959301 - 1960923 | 61103.2 |
| rna polymerase sigma factor | ALPR1_RS08340 | Not Available | Positive | 1961237 - 1961785 | 21198.3 |
| outer membrane beta-barrel protein | ALPR1_RS08345 | Not Available | Positive | 1961772 - 1963229 | 53519.8 |
| voc family protein | ALPR1_RS08350 | Not Available | Positive | 1963364 - 1963747 | 14275.8 |
| duf4397 domain-containing protein | ALPR1_RS08355 | Not Available | Negative | 1963911 - 1964639 | 26942.5 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS08360 | Not Available | Positive | 1965011 - 1968181 | 117772.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS08365 | Not Available | Positive | 1968233 - 1969984 | 66397.6 |
| atp-binding protein | ALPR1_RS08370 | Not Available | Negative | 1970052 - 1974161 | 156839.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
