Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | ALPR1_RS08120 | Not Available | Positive | 1890484 - 1891494 | 37440.1 |
| abc transporter permease | ALPR1_RS08125 | Not Available | Positive | 1891851 - 1894274 | 90402.7 |
| abc transporter permease | ALPR1_RS08130 | Not Available | Positive | 1894496 - 1896922 | 91557.1 |
| abc transporter permease | ALPR1_RS08135 | Not Available | Positive | 1897045 - 1899405 | 88343.5 |
| abc transporter permease | ALPR1_RS08140 | Not Available | Positive | 1899719 - 1902145 | 90037.5 |
| abc transporter permease | ALPR1_RS08145 | Not Available | Positive | 1902346 - 1904754 | 89703.7 |
| bestrophin family protein | ALPR1_RS08150 | Not Available | Positive | 1904978 - 1905928 | 36616.8 |
| hypothetical protein | ALPR1_RS08155 | Not Available | Negative | 1905964 - 1906902 | 34813.2 |
| hypothetical protein | ALPR1_RS08160 | Not Available | Positive | 1907422 - 1907703 | 10869.0 |
| hypothetical protein | ALPR1_RS08165 | Not Available | Positive | 1907804 - 1908379 | 22756.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
