Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ALPR1_RS08070 | Not Available | Positive | 1871859 - 1874264 | 88305.0 |
| abc transporter permease | ALPR1_RS08075 | Not Available | Positive | 1874359 - 1876779 | 89001.9 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS08080 | Not Available | Positive | 1877609 - 1880713 | 115727.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS08085 | Not Available | Positive | 1880725 - 1882572 | 69538.2 |
| duf3823 domain-containing protein | ALPR1_RS08090 | Not Available | Positive | 1882585 - 1883262 | 24556.4 |
| head gin domain-containing protein | ALPR1_RS20250 | Not Available | Positive | 1883500 - 1884189 | 23612.2 |
| abc transporter permease | ALPR1_RS08100 | Not Available | Positive | 1884260 - 1886686 | 90207.3 |
| head gin domain-containing protein | ALPR1_RS08105 | Not Available | Positive | 1886944 - 1887639 | 24642.1 |
| bestrophin family protein | ALPR1_RS08110 | Not Available | Negative | 1887887 - 1888873 | 38440.5 |
| cytochrome ubiquinol oxidase subunit i | ALPR1_RS08115 | Not Available | Positive | 1889130 - 1890473 | 49103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
