Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ALPR1_RS08015 | Not Available | Positive | 1853560 - 1855881 | 85382.2 |
| abc transporter permease | ALPR1_RS08020 | Not Available | Positive | 1856382 - 1858835 | 91412.8 |
| m43 family zinc metalloprotease | ALPR1_RS08025 | Not Available | Negative | 1858990 - 1860459 | 56066.7 |
| hypothetical protein | ALPR1_RS08030 | Not Available | Negative | 1860875 - 1861474 | 22585.7 |
| cell division protein ftsa | ALPR1_RS21095 | Not Available | Negative | 1861929 - 1863097 | 42534.6 |
| hypothetical protein | ALPR1_RS08040 | Not Available | Negative | 1863259 - 1863753 | 18856.7 |
| fg-gap and vcbs repeat-containing protein | ALPR1_RS08045 | Not Available | Negative | 1864067 - 1865230 | 42392.8 |
| duf1330 domain-containing protein | ALPR1_RS08050 | Not Available | Negative | 1865356 - 1865793 | 16587.7 |
| abc transporter permease | ALPR1_RS08055 | Not Available | Positive | 1866191 - 1868554 | 88569.2 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | ALPR1_RS08060 | Not Available | Positive | 1869244 - 1870458 | 45139.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
