Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-binding domain-containing protein | ALPR1_RS07620 | Not Available | Negative | 1756473 - 1756943 | 17907.3 |
| heme-binding domain-containing protein | ALPR1_RS07625 | Not Available | Negative | 1756944 - 1757339 | 14804.7 |
| rna polymerase sigma factor | ALPR1_RS07630 | Not Available | Positive | 1757713 - 1758306 | 23051.6 |
| fecr family protein | ALPR1_RS07635 | Not Available | Positive | 1758461 - 1759543 | 41015.6 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS07640 | Not Available | Positive | 1759733 - 1762984 | 120548.0 |
| ragb/susd family nutrient uptake outer membrane protein | ALPR1_RS07645 | Not Available | Positive | 1762998 - 1764620 | 61079.0 |
| duf1080 domain-containing protein | ALPR1_RS07650 | Not Available | Positive | 1764743 - 1766530 | 64104.1 |
| c-type cytochrome | ALPR1_RS07655 | Not Available | Positive | 1766549 - 1768489 | 71053.9 |
| fad-dependent oxidoreductase | ALPR1_RS07660 | Not Available | Positive | 1768667 - 1770328 | 61997.8 |
| hypothetical protein | ALPR1_RS07665 | Not Available | Negative | 1770347 - 1770934 | 21686.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
