Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS07520 | Not Available | Positive | 1734928 - 1735518 | 23014.9 |
| hypothetical protein | ALPR1_RS07525 | Not Available | Negative | 1735534 - 1736280 | 28632.4 |
| voc family protein | ALPR1_RS07530 | Not Available | Negative | 1736613 - 1736999 | 14984.9 |
| s9 family peptidase | ALPR1_RS07535 | Not Available | Negative | 1737000 - 1739069 | 76941.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | ALPR1_RS07540 | Not Available | Negative | 1739117 - 1740424 | 49223.6 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | ALPR1_RS07545 | Not Available | Negative | 1740505 - 1741920 | 52036.4 |
| susc/raga family tonb-linked outer membrane protein | ALPR1_RS07550 | Not Available | Negative | 1741933 - 1745019 | 112740.0 |
| sodium-translocating pyrophosphatase | ALPR1_RS07555 | Not Available | Negative | 1745482 - 1747689 | 76989.0 |
| response regulator transcription factor | ALPR1_RS07560 | Not Available | Positive | 1748308 - 1749006 | 26813.4 |
| sensor histidine kinase | ALPR1_RS07565 | Not Available | Positive | 1749016 - 1750470 | 54135.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
