Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine/peptidylarginine deiminase | ALPR1_RS07470 | Not Available | Positive | 1722477 - 1723550 | 40519.7 |
| giy-yig nuclease family protein | ALPR1_RS07475 | Not Available | Negative | 1723898 - 1724200 | 12001.3 |
| abc transporter atp-binding protein | ALPR1_RS07480 | Not Available | Negative | 1724629 - 1725321 | 26205.7 |
| abc transporter permease | ALPR1_RS07485 | Not Available | Negative | 1725318 - 1726574 | 45766.6 |
| efflux rnd transporter periplasmic adaptor subunit | ALPR1_RS07490 | Not Available | Negative | 1726571 - 1727683 | 41677.8 |
| alpha/beta hydrolase | ALPR1_RS07495 | Not Available | Positive | 1727837 - 1728718 | 33400.6 |
| primosomal protein n' | ALPR1_RS07500 | Not Available | Negative | 1728721 - 1731240 | 95118.4 |
| thioredoxin domain-containing protein | ALPR1_RS07505 | Not Available | Negative | 1731244 - 1733280 | 77366.8 |
| gscfa domain-containing protein | ALPR1_RS07510 | Not Available | Negative | 1733277 - 1734269 | 38582.7 |
| sigma-70 family rna polymerase sigma factor | ALPR1_RS07515 | Not Available | Positive | 1734431 - 1734937 | 19751.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
