Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ALPR1_RS00695 | Not Available | Negative | 149613 - 152015 | 90681.8 |
| fatty acid desaturase | ALPR1_RS00700 | Not Available | Negative | 152069 - 152788 | 28228.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | ALPR1_RS00705 | Not Available | Negative | 152812 - 153657 | 31748.9 |
| lycopene cyclase domain-containing protein | ALPR1_RS00710 | Not Available | Negative | 153664 - 154371 | 27669.7 |
| phytoene/squalene synthase family protein | ALPR1_RS00715 | Not Available | Negative | 154373 - 155215 | 32517.9 |
| phytoene desaturase family protein | ALPR1_RS00720 | Not Available | Negative | 155212 - 156717 | 56958.1 |
| rna polymerase sigma factor | ALPR1_RS00725 | Not Available | Negative | 156722 - 157234 | 19749.8 |
| merr family transcriptional regulator | ALPR1_RS00730 | Not Available | Negative | 157428 - 158324 | 34086.6 |
| sterol desaturase family protein | ALPR1_RS00735 | Not Available | Negative | 158321 - 158767 | 17379.6 |
| carotenoid biosynthesis protein | ALPR1_RS00740 | Not Available | Negative | 158842 - 159507 | 25130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
