Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | ALPR1_RS07370 | Not Available | Negative | 1701993 - 1703393 | 52851.5 |
| alpha/beta hydrolase family protein | ALPR1_RS07375 | Not Available | Negative | 1703406 - 1704206 | 29957.7 |
| nuclear transport factor 2 family protein | ALPR1_RS07380 | Not Available | Negative | 1704229 - 1704678 | 16479.7 |
| vps10 domain-containing protein | ALPR1_RS07385 | Not Available | Negative | 1704832 - 1707912 | 115186.0 |
| pepsy-associated tm helix domain-containing protein | ALPR1_RS07390 | Not Available | Negative | 1708065 - 1709180 | 42484.7 |
| hypothetical protein | ALPR1_RS07395 | Not Available | Negative | 1709264 - 1710109 | 32141.6 |
| abc transporter permease | ALPR1_RS07400 | Not Available | Negative | 1710282 - 1712636 | 87914.2 |
| redoxin domain-containing protein | ALPR1_RS07405 | Not Available | Negative | 1712884 - 1713417 | 20435.9 |
| hypothetical protein | ALPR1_RS07410 | Not Available | Negative | 1713414 - 1713785 | 14136.9 |
| helix-turn-helix domain-containing protein | ALPR1_RS07415 | Not Available | Negative | 1713996 - 1714847 | 32580.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
