Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grea/greb family elongation factor | ALPR1_RS07270 | Not Available | Negative | 1681633 - 1682133 | 18388.3 |
| retropepsin-like aspartic protease | ALPR1_RS07275 | Not Available | Negative | 1682228 - 1683079 | 31690.9 |
| fumarylacetoacetase | ALPR1_RS07280 | Not Available | Positive | 1683446 - 1684714 | 47285.2 |
| hypothetical protein | ALPR1_RS07285 | Not Available | Positive | 1684956 - 1686458 | 55383.4 |
| fad-binding oxidoreductase | ALPR1_RS07290 | Not Available | Positive | 1686643 - 1687308 | 25139.7 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS07295 | Not Available | Negative | 1687380 - 1688291 | 33214.8 |
| serine hydrolase domain-containing protein | ALPR1_RS07300 | Not Available | Negative | 1688429 - 1690012 | 59741.1 |
| cation:proton antiporter | ALPR1_RS07305 | Not Available | Negative | 1690077 - 1691327 | 45226.3 |
| nuclear transport factor 2 family protein | ALPR1_RS07310 | Not Available | Positive | 1691456 - 1691923 | 17300.5 |
| duf4153 domain-containing protein | ALPR1_RS07315 | Not Available | Negative | 1691928 - 1693172 | 46680.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
