Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | ALPR1_RS07220 | Not Available | Positive | 1666920 - 1669457 | 95456.5 |
| sigma-54-dependent transcriptional regulator | ALPR1_RS07225 | Not Available | Negative | 1669459 - 1670862 | 52556.9 |
| hypothetical protein | ALPR1_RS07230 | Not Available | Negative | 1670949 - 1671266 | 11455.7 |
| amidophosphoribosyltransferase | ALPR1_RS07235 | Not Available | Positive | 1671626 - 1673509 | 71342.2 |
| m42 family metallopeptidase | ALPR1_RS07240 | Not Available | Positive | 1673629 - 1674681 | 38645.9 |
| app1 family protein | ALPR1_RS07245 | Not Available | Positive | 1674779 - 1675774 | 38088.8 |
| diacylglycerol/lipid kinase family protein | ALPR1_RS07250 | Not Available | Positive | 1675779 - 1676672 | 33426.4 |
| duf1080 domain-containing protein | ALPR1_RS07255 | Not Available | Positive | 1676757 - 1677563 | 30759.8 |
| n-acetylmuramoyl-l-alanine amidase | ALPR1_RS07260 | Not Available | Positive | 1677644 - 1678633 | 36932.5 |
| valine--trna ligase | ALPR1_RS07265 | Not Available | Negative | 1678704 - 1681337 | 100616.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
