Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS06970 | Not Available | Positive | 1606295 - 1607335 | 39409.7 |
| adenylosuccinate synthase | ALPR1_RS06975 | Not Available | Positive | 1607478 - 1608749 | 47095.8 |
| pkd domain-containing protein | ALPR1_RS06980 | Not Available | Positive | 1608846 - 1611173 | 84982.0 |
| type ix secretion system membrane protein porp/sprf | ALPR1_RS06985 | Not Available | Positive | 1611173 - 1612189 | 38214.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1612708 - 1614229 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1614360 - 1617216 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1617396 - 1617507 | Not Available |
| hypothetical protein | ALPR1_RS07005 | Not Available | Positive | 1617886 - 1618512 | 23917.6 |
| heavy metal translocating p-type atpase | ALPR1_RS07010 | Not Available | Positive | 1618579 - 1621005 | 90013.3 |
| cbb3-type cytochrome oxidase assembly protein ccos | ALPR1_RS07015 | Not Available | Positive | 1621007 - 1621195 | 7125.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
