Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | ALPR1_RS06920 | Not Available | Positive | 1596441 - 1596752 | 12079.6 |
| lipid-a-disaccharide synthase | ALPR1_RS06925 | Not Available | Positive | 1596825 - 1597949 | 41754.0 |
| glycoside hydrolase family 30 protein | ALPR1_RS06930 | Not Available | Positive | 1597955 - 1599457 | 55985.0 |
| atp-dependent clp protease atp-binding subunit clpx | ALPR1_RS06935 | Not Available | Negative | 1599531 - 1600757 | 45334.8 |
| clpp family protease | ALPR1_RS06940 | Not Available | Negative | 1600761 - 1601432 | 24915.0 |
| trigger factor | ALPR1_RS06945 | Not Available | Negative | 1601508 - 1602833 | 49877.8 |
| Trna-leu | Not Available | Not Available | Positive | 1602930 - 1603014 | Not Available |
| rela/spot family protein | ALPR1_RS06955 | Not Available | Positive | 1603186 - 1605405 | 84807.2 |
| fur family transcriptional regulator | ALPR1_RS06960 | Not Available | Positive | 1605460 - 1605927 | 18187.8 |
| stas domain-containing protein | ALPR1_RS06965 | Not Available | Positive | 1605928 - 1606269 | 12601.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
