Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish | ALPR1_RS06770 | Not Available | Positive | 1558608 - 1559204 | 22553.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | ALPR1_RS06775 | Not Available | Positive | 1559347 - 1560063 | 25668.0 |
| imidazole glycerol phosphate synthase subunit hisf | ALPR1_RS06780 | Not Available | Positive | 1560179 - 1560934 | 26686.2 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | ALPR1_RS06785 | Not Available | Positive | 1561017 - 1561619 | 22184.6 |
| s41 family peptidase | ALPR1_RS06790 | Not Available | Negative | 1561660 - 1562979 | 49721.9 |
| dabb family protein | ALPR1_RS06795 | Not Available | Negative | 1563025 - 1563417 | 14757.7 |
| aldo/keto reductase | ALPR1_RS06800 | Not Available | Positive | 1563573 - 1564559 | 36574.8 |
| hypothetical protein | ALPR1_RS06805 | Not Available | Negative | 1564599 - 1565522 | 34725.8 |
| translational gtpase typa | ALPR1_RS06810 | Not Available | Negative | 1565674 - 1567479 | 67504.2 |
| gh92 family glycosyl hydrolase | ALPR1_RS06815 | Not Available | Positive | 1567726 - 1569876 | 80167.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
