Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | ALPR1_RS06615 | Not Available | Negative | 1530677 - 1531399 | 26225.2 |
| duf5683 domain-containing protein | ALPR1_RS06620 | Not Available | Negative | 1531402 - 1531953 | 20806.0 |
| parb/repb/spo0j family partition protein | ALPR1_RS06625 | Not Available | Negative | 1532011 - 1532922 | 34239.5 |
| para family protein | ALPR1_RS06630 | Not Available | Negative | 1532926 - 1533708 | 28367.4 |
| membrane protein insertase yidc | ALPR1_RS06635 | Not Available | Negative | 1533993 - 1535792 | 67595.9 |
| ctp synthase | ALPR1_RS06640 | Not Available | Negative | 1535835 - 1537451 | 60416.9 |
| hypothetical protein | ALPR1_RS06645 | Not Available | Positive | 1538061 - 1538468 | 14863.0 |
| rna polymerase sigma factor | ALPR1_RS06655 | Not Available | Negative | 1538936 - 1539511 | 22540.3 |
| duf6249 domain-containing protein | ALPR1_RS06660 | Not Available | Positive | 1539623 - 1539958 | 11849.8 |
| hypothetical protein | ALPR1_RS06665 | Not Available | Positive | 1540062 - 1540550 | 18580.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
