Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALPR1_RS06565 | Not Available | Positive | 1524583 - 1524828 | 9264.24 |
| 50s ribosomal protein l9 | ALPR1_RS06570 | Not Available | Negative | 1524888 - 1525331 | 15879.3 |
| 30s ribosomal protein s18 | ALPR1_RS06575 | Not Available | Negative | 1525371 - 1525622 | 9702.06 |
| 30s ribosomal protein s6 | ALPR1_RS06580 | Not Available | Negative | 1525619 - 1525990 | 14492.5 |
| hypothetical protein | ALPR1_RS06585 | Not Available | Negative | 1526121 - 1527050 | 35380.9 |
| sam-dependent methyltransferase | ALPR1_RS06590 | Not Available | Positive | 1527077 - 1527667 | 22258.4 |
| class i sam-dependent methyltransferase | ALPR1_RS06595 | Not Available | Negative | 1527656 - 1528318 | 25198.0 |
| co2+/mg2+ efflux protein apag | ALPR1_RS06600 | Not Available | Negative | 1528437 - 1528823 | 14374.2 |
| uracil-dna glycosylase | ALPR1_RS06605 | Not Available | Positive | 1528885 - 1529547 | 24863.1 |
| signal peptidase i | ALPR1_RS06610 | Not Available | Negative | 1529585 - 1530661 | 41559.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
