Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4783 domain-containing protein | ALPR1_RS20145 | Not Available | Negative | 128687 - 129217 | 19750.4 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | ALPR1_RS00600 | Not Available | Positive | 129218 - 130741 | 55677.4 |
| hypothetical protein | ALPR1_RS00605 | Not Available | Positive | 130741 - 131304 | 21476.6 |
| amidase | ALPR1_RS00610 | Not Available | Negative | 131337 - 132998 | 60283.5 |
| hypothetical protein | ALPR1_RS00615 | Not Available | Positive | 133090 - 133536 | 16899.9 |
| hypothetical protein | ALPR1_RS00620 | Not Available | Negative | 133616 - 133927 | 11722.8 |
| dna polymerase i | ALPR1_RS00625 | Not Available | Positive | 134087 - 136912 | 106591.0 |
| dna repair protein rada | ALPR1_RS00630 | Not Available | Positive | 137076 - 138449 | 50216.0 |
| dm13 domain-containing protein | ALPR1_RS00635 | Not Available | Negative | 138452 - 138883 | 16418.2 |
| lipocalin family protein | ALPR1_RS00640 | Not Available | Positive | 139048 - 139581 | 20505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
