Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | ALPR1_RS06375 | Not Available | Negative | 1479459 - 1480343 | 35163.7 |
| dodecin family protein | ALPR1_RS06380 | Not Available | Negative | 1480487 - 1480687 | 7239.69 |
| mmcq/yjbr family dna-binding protein | ALPR1_RS06385 | Not Available | Positive | 1480808 - 1481158 | 13208.8 |
| abc transporter atp-binding protein | ALPR1_RS06390 | Not Available | Positive | 1481155 - 1482108 | 35731.9 |
| app1 family protein | ALPR1_RS06395 | Not Available | Positive | 1482223 - 1483260 | 39432.7 |
| c-type cytochrome | ALPR1_RS06400 | Not Available | Negative | 1483262 - 1483663 | 14906.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ALPR1_RS06405 | Not Available | Negative | 1483750 - 1484274 | 19504.7 |
| class i sam-dependent methyltransferase | ALPR1_RS06410 | Not Available | Negative | 1484282 - 1484998 | 27802.2 |
| yfho family protein | ALPR1_RS06415 | Not Available | Negative | 1484985 - 1487396 | 88213.2 |
| hypothetical protein | ALPR1_RS20800 | Not Available | Positive | 1487395 - 1487547 | 5812.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
