Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit iv family protein | ALPR1_RS06325 | Not Available | Positive | 1465858 - 1466187 | 12835.3 |
| sco family protein | ALPR1_RS06330 | Not Available | Positive | 1466260 - 1466928 | 25379.3 |
| duf420 domain-containing protein | ALPR1_RS06335 | Not Available | Positive | 1466915 - 1467469 | 20836.0 |
| hypothetical protein | ALPR1_RS06340 | Not Available | Positive | 1467501 - 1467752 | 9347.88 |
| atp-binding protein | ALPR1_RS06345 | Not Available | Positive | 1467808 - 1471512 | 141389.0 |
| hypothetical protein | ALPR1_RS06350 | Not Available | Positive | 1471556 - 1475023 | 133599.0 |
| sdr family oxidoreductase | ALPR1_RS06355 | Not Available | Positive | 1475087 - 1475791 | 25658.9 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | ALPR1_RS06360 | Not Available | Positive | 1475797 - 1477782 | 73845.7 |
| duf6728 family protein | ALPR1_RS06365 | Not Available | Positive | 1477826 - 1478020 | 7583.55 |
| acyltransferase family protein | ALPR1_RS06370 | Not Available | Negative | 1478071 - 1479174 | 41693.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
