Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ALPR1_RS06225 | Not Available | Positive | 1442512 - 1443228 | 26934.8 |
| putative abc exporter domain-containing protein | ALPR1_RS06230 | Not Available | Positive | 1443221 - 1444849 | 61739.6 |
| pyridoxal-phosphate dependent enzyme | ALPR1_RS06235 | Not Available | Positive | 1444949 - 1446316 | 50242.1 |
| hypothetical protein | ALPR1_RS06240 | Not Available | Positive | 1446327 - 1446992 | 25298.3 |
| lysophospholipid acyltransferase family protein | ALPR1_RS06245 | Not Available | Negative | 1447001 - 1447738 | 28066.7 |
| 30s ribosomal protein s1 | ALPR1_RS06250 | Not Available | Positive | 1448055 - 1449827 | 65727.3 |
| outer membrane beta-barrel protein | ALPR1_RS06255 | Not Available | Positive | 1450098 - 1450694 | 22094.5 |
| Trna-cys | Not Available | Not Available | Positive | 1450836 - 1450906 | Not Available |
| c-type cytochrome | ALPR1_RS06265 | Not Available | Positive | 1451273 - 1452541 | 45737.7 |
| tat-variant-translocated molybdopterin oxidoreductase | ALPR1_RS06270 | Not Available | Positive | 1452581 - 1455667 | 112052.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
