Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonylcarbamoyladenylate synthase | ALPR1_RS06175 | Not Available | Positive | 1432059 - 1432688 | 23557.7 |
| wbqc family protein | ALPR1_RS06180 | Not Available | Positive | 1432743 - 1433366 | 24296.8 |
| atp-dependent clp protease atp-binding subunit | ALPR1_RS06185 | Not Available | Positive | 1433448 - 1435979 | 93664.7 |
| hypothetical protein | ALPR1_RS06190 | Not Available | Negative | 1436065 - 1436352 | 10566.7 |
| helix-hairpin-helix domain-containing protein | ALPR1_RS06195 | Not Available | Negative | 1436402 - 1438117 | 64391.3 |
| eve domain-containing protein | ALPR1_RS06200 | Not Available | Positive | 1438221 - 1438619 | 15348.4 |
| hypothetical protein | ALPR1_RS06205 | Not Available | Positive | 1438616 - 1440238 | 63403.8 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | ALPR1_RS06210 | Not Available | Positive | 1440273 - 1440821 | 21117.6 |
| aspartate carbamoyltransferase catalytic subunit | ALPR1_RS06215 | Not Available | Positive | 1440824 - 1441750 | 33988.5 |
| hypothetical protein | ALPR1_RS06220 | Not Available | Negative | 1441797 - 1442414 | 22379.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
