Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ALPR1_RS06075 | Not Available | Positive | 1402608 - 1404986 | 86885.2 |
| pepsy-associated tm helix domain-containing protein | ALPR1_RS06080 | Not Available | Positive | 1404986 - 1406152 | 44633.8 |
| hypothetical protein | ALPR1_RS06085 | Not Available | Positive | 1406298 - 1406837 | 20430.4 |
| endo-1,4-beta-xylanase | ALPR1_RS06090 | Not Available | Positive | 1406906 - 1408015 | 42694.5 |
| nad(p)/fad-dependent oxidoreductase | ALPR1_RS06095 | Not Available | Negative | 1408063 - 1408968 | 32985.3 |
| 3-ketoacyl-acp reductase | ALPR1_RS06100 | Not Available | Negative | 1409066 - 1409788 | 25475.7 |
| subclass b1 metallo-beta-lactamase | ALPR1_RS06105 | Not Available | Negative | 1409912 - 1410652 | 27247.6 |
| pvc-type heme-binding cxxch protein | ALPR1_RS06110 | Not Available | Negative | 1410752 - 1413763 | 112101.0 |
| hypothetical protein | ALPR1_RS06115 | Not Available | Negative | 1414054 - 1415847 | 67715.0 |
| c-type cytochrome | ALPR1_RS06120 | Not Available | Negative | 1416025 - 1418688 | 96898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
