Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | ALPR1_RS05975 | Not Available | Negative | 1375111 - 1376631 | 57549.0 |
| glpgli family protein | ALPR1_RS05980 | Not Available | Positive | 1376745 - 1377575 | 30857.2 |
| tonb-dependent receptor | ALPR1_RS05985 | Not Available | Positive | 1377606 - 1380290 | 102056.0 |
| gfo/idh/moca family protein | ALPR1_RS05990 | Not Available | Positive | 1380426 - 1381523 | 40171.3 |
| c-type cytochrome | ALPR1_RS05995 | Not Available | Positive | 1381790 - 1382773 | 36089.7 |
| c-type cytochrome | ALPR1_RS06000 | Not Available | Positive | 1382907 - 1383905 | 36961.6 |
| gfo/idh/moca family protein | ALPR1_RS06005 | Not Available | Negative | 1383907 - 1385001 | 40689.7 |
| aspartyl/asparaginyl beta-hydroxylase domain-containing protein | ALPR1_RS06010 | Not Available | Positive | 1385093 - 1385629 | 20650.9 |
| hypothetical protein | ALPR1_RS06015 | Not Available | Negative | 1385677 - 1386141 | 17609.3 |
| m28 family metallopeptidase | ALPR1_RS06020 | Not Available | Positive | 1386268 - 1387905 | 61122.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
