Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | ALPR1_RS05920 | Not Available | Negative | 1362076 - 1363065 | 36407.5 |
| amidohydrolase | ALPR1_RS05925 | Not Available | Positive | 1363294 - 1364718 | 50854.4 |
| patatin-like phospholipase family protein | ALPR1_RS05930 | Not Available | Positive | 1364747 - 1367101 | 87957.7 |
| glycoside hydrolase family 43 protein | ALPR1_RS05935 | Not Available | Negative | 1367082 - 1368182 | 41031.4 |
| gluconate 2-dehydrogenase subunit 3 family protein | ALPR1_RS05945 | Not Available | Positive | 1368382 - 1368918 | 19871.0 |
| gmc oxidoreductase | ALPR1_RS05950 | Not Available | Positive | 1368929 - 1370626 | 63349.5 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS05955 | Not Available | Positive | 1370649 - 1371512 | 31787.3 |
| alpha/beta fold hydrolase | ALPR1_RS05960 | Not Available | Positive | 1371670 - 1372938 | 48166.2 |
| sulfatase | ALPR1_RS05965 | Not Available | Positive | 1373015 - 1374430 | 53701.6 |
| response regulator transcription factor | ALPR1_RS05970 | Not Available | Negative | 1374431 - 1375114 | 26360.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
