Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1304 domain-containing protein | ALPR1_RS00545 | Not Available | Positive | 120976 - 121338 | 13400.0 |
| type ii toxin-antitoxin system rele/pare family toxin | ALPR1_RS00550 | Not Available | Negative | 121379 - 121681 | 11830.6 |
| hypothetical protein | ALPR1_RS00555 | Not Available | Negative | 121678 - 121926 | 9567.48 |
| hypothetical protein | ALPR1_RS00560 | Not Available | Negative | 122095 - 123618 | 57522.0 |
| vwa domain-containing protein | ALPR1_RS00565 | Not Available | Negative | 123624 - 124724 | 41579.8 |
| hypothetical protein | ALPR1_RS00570 | Not Available | Positive | 124912 - 125142 | 8748.01 |
| trna epoxyqueuosine(34) reductase queg | ALPR1_RS00575 | Not Available | Positive | 125264 - 126199 | 35626.6 |
| magnesium/cobalt transporter cora | ALPR1_RS00580 | Not Available | Positive | 126216 - 127325 | 42933.4 |
| meta domain-containing protein | ALPR1_RS00585 | Not Available | Negative | 127326 - 127730 | 15057.0 |
| carboxylating nicotinate-nucleotide diphosphorylase | ALPR1_RS00590 | Not Available | Negative | 127776 - 128633 | 31338.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
