Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | ALPR1_RS05870 | Not Available | Positive | 1350907 - 1351401 | 18553.3 |
| amidohydrolase family protein | ALPR1_RS05875 | Not Available | Positive | 1351497 - 1352864 | 50747.1 |
| aldose epimerase family protein | ALPR1_RS05880 | Not Available | Positive | 1352908 - 1354059 | 42872.5 |
| hypothetical protein | ALPR1_RS05885 | Not Available | Positive | 1354120 - 1355256 | 42796.2 |
| glycoside hydrolase family 3 protein | ALPR1_RS05890 | Not Available | Negative | 1355330 - 1356892 | 58473.5 |
| mfs transporter | ALPR1_RS05895 | Not Available | Negative | 1356984 - 1358249 | 46655.1 |
| gnat family n-acetyltransferase | ALPR1_RS05900 | Not Available | Negative | 1358246 - 1358725 | 17872.7 |
| glycoside hydrolase family 10 protein | ALPR1_RS05905 | Not Available | Negative | 1358736 - 1360367 | 62657.3 |
| n-acetylmuramoyl-l-alanine amidase | ALPR1_RS05910 | Not Available | Negative | 1360380 - 1361051 | 25770.7 |
| deor/glpr family dna-binding transcription regulator | ALPR1_RS05915 | Not Available | Positive | 1361262 - 1362011 | 27827.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
