Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | ALPR1_RS05820 | Not Available | Negative | 1337018 - 1338259 | 45566.5 |
| glutamate 5-kinase | ALPR1_RS05825 | Not Available | Negative | 1338252 - 1339334 | 39934.8 |
| geranylgeranylglycerol-phosphate geranylgeranyltransferase | ALPR1_RS05830 | Not Available | Negative | 1339510 - 1340382 | 33265.0 |
| gfo/idh/moca family protein | ALPR1_RS05835 | Not Available | Positive | 1340521 - 1341891 | 52075.6 |
| carbon-nitrogen hydrolase family protein | ALPR1_RS05840 | Not Available | Negative | 1341981 - 1342940 | 35947.0 |
| rok family protein | ALPR1_RS05845 | Not Available | Negative | 1343084 - 1343944 | 31084.5 |
| pig-l family deacetylase | ALPR1_RS05850 | Not Available | Negative | 1344040 - 1346370 | 88113.1 |
| duf294 nucleotidyltransferase-like domain-containing protein | ALPR1_RS05855 | Not Available | Negative | 1346609 - 1348063 | 56221.0 |
| sulfatase | ALPR1_RS05860 | Not Available | Negative | 1348163 - 1349677 | 57169.2 |
| glycoside hydrolase family protein | ALPR1_RS05865 | Not Available | Negative | 1349713 - 1350756 | 39618.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
