Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thua domain-containing protein | ALPR1_RS05770 | Not Available | Negative | 1323526 - 1326939 | 124774.0 |
| galactokinase | ALPR1_RS05775 | Not Available | Negative | 1327108 - 1328256 | 42310.8 |
| laci family dna-binding transcriptional regulator | ALPR1_RS05780 | Not Available | Negative | 1328257 - 1329282 | 38073.2 |
| m28 family peptidase | ALPR1_RS05785 | Not Available | Negative | 1329341 - 1330321 | 36987.2 |
| cysteine--trna ligase | ALPR1_RS05790 | Not Available | Negative | 1330311 - 1331801 | 56614.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | ALPR1_RS05795 | Not Available | Negative | 1332093 - 1333619 | 55610.1 |
| mfs transporter | ALPR1_RS05800 | Not Available | Negative | 1333797 - 1335047 | 45625.1 |
| tetr/acrr family transcriptional regulator | ALPR1_RS05805 | Not Available | Negative | 1335089 - 1335685 | 22775.3 |
| cupin domain-containing protein | ALPR1_RS05810 | Not Available | Positive | 1335758 - 1336192 | 16152.2 |
| phosphoribosylglycinamide formyltransferase | ALPR1_RS05815 | Not Available | Negative | 1336326 - 1336898 | 21053.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
