Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | ALPR1_RS05575 | Not Available | Negative | 1274297 - 1275157 | 32046.4 |
| duf1003 domain-containing protein | ALPR1_RS05580 | Not Available | Negative | 1275154 - 1275684 | 20106.8 |
| fg-gap repeat domain-containing protein | ALPR1_RS05585 | Not Available | Negative | 1275816 - 1276946 | 41961.1 |
| pvc-type heme-binding cxxch protein | ALPR1_RS05590 | Not Available | Negative | 1277139 - 1280291 | 118489.0 |
| duf2911 domain-containing protein | ALPR1_RS05595 | Not Available | Negative | 1280508 - 1281110 | 21800.2 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS05600 | Not Available | Negative | 1281135 - 1281977 | 31654.0 |
| 6-bladed beta-propeller | ALPR1_RS05605 | Not Available | Positive | 1282068 - 1283108 | 38826.1 |
| voc family protein | ALPR1_RS05610 | Not Available | Positive | 1283134 - 1283514 | 14153.0 |
| alpha-ketoglutarate-dependent dioxygenase alkb family protein | ALPR1_RS05615 | Not Available | Positive | 1283541 - 1284155 | 23532.2 |
| lutc/ykgg family protein | ALPR1_RS05620 | Not Available | Negative | 1284158 - 1284718 | 20169.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
