Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene desaturase family protein | ALPR1_RS05430 | Not Available | Negative | 1240618 - 1242057 | 51950.3 |
| httm domain-containing protein | ALPR1_RS05435 | Not Available | Negative | 1242063 - 1243160 | 42815.4 |
| hypothetical protein | ALPR1_RS05440 | Not Available | Negative | 1243153 - 1243635 | 18695.1 |
| hypothetical protein | ALPR1_RS05445 | Not Available | Negative | 1244240 - 1244860 | 22876.0 |
| lyttr family dna-binding domain-containing protein | ALPR1_RS05450 | Not Available | Positive | 1245488 - 1246282 | 30608.4 |
| s41 family peptidase | ALPR1_RS05455 | Not Available | Positive | 1246372 - 1247616 | 47613.4 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS05460 | Not Available | Negative | 1247798 - 1248631 | 31399.9 |
| ai-2e family transporter | ALPR1_RS05465 | Not Available | Positive | 1249228 - 1250439 | 43766.3 |
| bile acid:sodium symporter family protein | ALPR1_RS05470 | Not Available | Negative | 1250537 - 1251430 | 31921.9 |
| porin | ALPR1_RS05475 | Not Available | Negative | 1251923 - 1252948 | 38706.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
