Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | ALPR1_RS05330 | Not Available | Positive | 1218245 - 1219117 | 33100.1 |
| thua domain-containing protein | ALPR1_RS05335 | Not Available | Positive | 1219192 - 1220193 | 37185.4 |
| sugar phosphate isomerase/epimerase family protein | ALPR1_RS05340 | Not Available | Positive | 1220251 - 1221102 | 31575.4 |
| duf2461 domain-containing protein | ALPR1_RS05345 | Not Available | Negative | 1221190 - 1221858 | 26301.5 |
| alpha/beta hydrolase family protein | ALPR1_RS05350 | Not Available | Negative | 1221910 - 1223220 | 48230.9 |
| cyclase family protein | ALPR1_RS05355 | Not Available | Positive | 1223488 - 1224324 | 30605.4 |
| ydei/ompd-associated family protein | ALPR1_RS05360 | Not Available | Negative | 1224358 - 1224918 | 21683.1 |
| marr family winged helix-turn-helix transcriptional regulator | ALPR1_RS05365 | Not Available | Negative | 1225020 - 1225481 | 17833.7 |
| glutathione peroxidase | ALPR1_RS05370 | Not Available | Negative | 1225478 - 1225960 | 18192.0 |
| hypothetical protein | ALPR1_RS05375 | Not Available | Negative | 1225971 - 1226393 | 16097.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
