Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | ALPR1_RS05120 | Not Available | Positive | 1171711 - 1172151 | 16092.7 |
| alanine/ornithine racemase family plp-dependent enzyme | ALPR1_RS05125 | Not Available | Positive | 1172153 - 1173226 | 40242.5 |
| porin family protein | ALPR1_RS05130 | Not Available | Positive | 1173304 - 1173894 | 21500.4 |
| so2930 family diheme c-type cytochrome | ALPR1_RS05135 | Not Available | Negative | 1174082 - 1175131 | 39036.1 |
| parallel beta-helix domain-containing protein | ALPR1_RS05140 | Not Available | Negative | 1175178 - 1176470 | 47144.6 |
| crp/fnr family transcriptional regulator | ALPR1_RS05145 | Not Available | Negative | 1176554 - 1177117 | 22119.4 |
| porin family protein | ALPR1_RS05150 | Not Available | Positive | 1177294 - 1177845 | 20328.3 |
| porin family protein | ALPR1_RS05155 | Not Available | Positive | 1177978 - 1178526 | 19651.4 |
| crossover junction endodeoxyribonuclease ruvc | ALPR1_RS05160 | Not Available | Negative | 1178572 - 1179147 | 21255.1 |
| glycosyltransferase family 2 protein | ALPR1_RS05165 | Not Available | Positive | 1179169 - 1180296 | 42646.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
