Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus machipongonensis |
| Strain | strain PR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Choanoflagellata |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1459759 bp
Thymine Count
1474794 bp
Guanine Count
927619 bp
Cytosine Count
924552 bp
Genome Length
4787724 bp
Protein-coding Genes
3982 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | ALPR1_RS04920 | Not Available | Positive | 1129385 - 1130320 | 34272.2 |
| sodium-dependent transporter | ALPR1_RS04925 | Not Available | Positive | 1130384 - 1131769 | 49795.0 |
| porin family protein | ALPR1_RS04930 | Not Available | Positive | 1131954 - 1132547 | 21732.0 |
| hypothetical protein | ALPR1_RS04935 | Not Available | Negative | 1132603 - 1133781 | 44638.5 |
| hypothetical protein | ALPR1_RS04940 | Not Available | Negative | 1133778 - 1134917 | 43700.3 |
| duf4221 family protein | ALPR1_RS04945 | Not Available | Negative | 1134910 - 1136103 | 44611.6 |
| gluconate 2-dehydrogenase subunit 3 family protein | ALPR1_RS04950 | Not Available | Negative | 1136205 - 1136912 | 26859.9 |
| gmc oxidoreductase | ALPR1_RS04955 | Not Available | Negative | 1136916 - 1138658 | 64096.0 |
| arylesterase | ALPR1_RS04960 | Not Available | Negative | 1138786 - 1139466 | 25069.1 |
| abc transporter atp-binding protein | ALPR1_RS04965 | Not Available | Positive | 1139707 - 1140384 | 24443.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
