Helicobacter canadensis MIT 98-5491

microaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter canadensis MIT 98-5491 is a gram-negative bacterium characterized as a microaerophile, indicating that it requires oxygen at lower levels than that found in the atmosphere for optimal growth. This unique oxygen requirement suggests a specialized ecological niche, possibly within environments where oxygen levels are limited, such as certain gastrointestinal tracts. The genome of H. canadensis MIT 98-5491 contains a single replicon, which is a notable feature as it reflects the bacterium's genetic organization and replication strategy. The genetic information for this organism can be accessed through the accession number NZ_CM000776.2, which provides a resource for researchers seeking detailed genomic data. Understanding the characteristics of Helicobacter canadensis MIT 98-5491 contributes to the broader knowledge of the Helicobacter genus, which is known for its association with various host species, including humans. The microaerophilic nature of this bacterium may play a role in its interactions with host organisms, influencing its potential pathogenicity or symbiotic relationships. In summary, the distinct traits of Helicobacter canadensis MIT 98-5491, particularly its gram-negative status and microaerophilic growth requirement, highlight its adaptation to specific ecological niches and underscore the importance of studying its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter canadensis
StrainMIT 98-5491

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Helicobacter canadensis MIT 98-5491
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter canadensis MIT 98-5491


Gene Summary

Adenine Count

534887 bp

Thymine Count

541095 bp

Guanine Count

288707 bp

Cytosine Count

258307 bp

Genome Length

1623845 bp

Protein-coding Genes

1574 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hesa/moeb/thif family proteinHCAN_RS00105Not AvailablePositive18405 - 1918728244.4
hypothetical proteinHCAN_RS00110Not AvailableNegative19191 - 1963116947.5
d-sedoheptulose 7-phosphate isomeraseHCAN_RS00115Not AvailableNegative19634 - 2020320563.9
d-glycero-beta-d-manno-heptose-7-phosphate kinaseHCAN_RS00120Not AvailableNegative20206 - 2172956124.1
adp-glyceromanno-heptose 6-epimeraseHCAN_RS00125Not AvailableNegative21730 - 2272837483.7
hdod domain-containing proteinHCAN_RS00130Not AvailablePositive22851 - 2366930866.7
rnb domain-containing ribonucleaseHCAN_RS00135Not AvailablePositive23666 - 2581682401.9
hypothetical proteinHCAN_RS00140Not AvailablePositive25816 - 2681738182.9
30s ribosomal protein s6HCAN_RS00145Not AvailablePositive26895 - 2732316675.1
single-stranded dna-binding proteinHCAN_RS00150Not AvailablePositive27333 - 2781517926.1

Displaying genes 21 – 30 of 1626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

589 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000950L-xyluloseC5H10O5Chemical structure of L-xylulose527-50-4
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 589 metabolites

Health Effects

No health effects information available for this bacterium.