Escherichia coli strain KS-NP019

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain KS-NP019 is a Gram-negative, rod-shaped bacterium that is a facultative anaerobe, thriving optimally at 37°C within a mesophilic temperature range. This strain exhibits mobility, characterized by the presence of flagella, and typically arranges itself in pairs or singles. Ecologically, KS-NP019 is associated with a broad range of hosts, including Homo sapiens, various livestock such as Bos taurus and Sus scrofa, as well as other vertebrates and invertebrates like Apis mellifera and Solanum lycopersicum. It demonstrates a free-living biotic relationship, indicating its capacity to exist independently in various environments. Clinically, this strain is significant due to its association with numerous health effects in humans, including urinary tract infections (UTIs), gastrointestinal infections, and severe conditions like hemolytic uremic syndrome (HUS) and neonatal meningitis. The strain has been implicated in foodborne infections and complications related to pregnancy, underscoring its pathogenic potential. The presence of two replicons and two membranes also suggests a complex genetic structure, which may contribute to its adaptability and virulence. Overall, E. coli strain KS-NP019 exemplifies the intricate relationships between microbial pathogens and their hosts, highlighting the importance of understanding microbial diversity and its implications for human health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain KS-NP019

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain KS-NP019
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain KS-NP019


Gene Summary

Adenine Count

1275315 bp

Thymine Count

1270163 bp

Guanine Count

1315610 bp

Cytosine Count

1317672 bp

Genome Length

5178760 bp

Protein-coding Genes

4450 genes

Non-Coding Genes

635 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Phage-related capsid packaging proteinFFG67_RS00020Not AvailableNegative5208 - 624239115.8
GppFFG67_RS00025Not AvailableNegative6242 - 801466674.3
Capsid-scaffolding proteinFFG67_RS00030Not AvailablePositive8188 - 904231475.3
Major capsid protein precursorFFG67_RS00035Not AvailablePositive9101 - 1017440241.7
Terminase endonuclease subunitFFG67_RS00040Not AvailablePositive10178 - 1092127485.7
Head completion/stabilization proteinFFG67_RS00045Not AvailablePositive11021 - 1153019120.9
Tail proteinFFG67_RS00050Not AvailablePositive11530 - 117337053.42
HolinFFG67_RS00055Not AvailablePositive11737 - 120189787.61
EndolysinFFG67_RS00060Not AvailablePositive12018 - 1251518539.1
HolinFFG67_RS00065Not AvailablePositive12530 - 1295515494.5

Displaying genes 1 – 10 of 5181 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 74 in total