Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic c4-dicarboxylate transporter dcuc | FFG67_RS23085 | Not Available | Negative | 4797237 - 4798622 | 48415.3 |
| lipid iv(a) palmitoyltransferase pagp | FFG67_RS23090 | Not Available | Positive | 4799210 - 4799770 | 21770.6 |
| transcription antiterminator/rna stability regulator cspe | FFG67_RS23095 | Not Available | Positive | 4799945 - 4800154 | 7463.84 |
| fluoride efflux transporter crcb | FFG67_RS23100 | Not Available | Negative | 4800209 - 4800592 | 13766.1 |
| deaminated glutathione amidase | FFG67_RS23105 | Not Available | Positive | 4800685 - 4801473 | 28611.0 |
| twin-arginine translocase subunit tate | FFG67_RS23110 | Not Available | Positive | 4801602 - 4801805 | 7024.71 |
| lipoyl synthase | FFG67_RS23115 | Not Available | Negative | 4801906 - 4802871 | 36073.8 |
| ybef family transcriptional regulator | FFG67_RS23120 | Not Available | Negative | 4803080 - 4804033 | 35962.5 |
| lipoyl(octanoyl) transferase lipb | FFG67_RS23125 | Not Available | Negative | 4804292 - 4804933 | 23884.0 |
| duf493 family protein ybed | FFG67_RS23130 | Not Available | Negative | 4805034 - 4805297 | 9827.92 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





