Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | FFG67_RS20515 | Not Available | Negative | 4266404 - 4266934 | 19935.0 |
| atp-dependent helicase hrpb | FFG67_RS20520 | Not Available | Positive | 4267008 - 4269437 | 89099.1 |
| bifunctional glycosyl transferase/transpeptidase | FFG67_RS20525 | Not Available | Positive | 4269633 - 4272176 | 94623.4 |
| ferrichrome porin fhua | FFG67_RS20530 | Not Available | Positive | 4272396 - 4274639 | 82186.5 |
| fe3+-hydroxamate abc transporter atp-binding protein fhuc | FFG67_RS20535 | Not Available | Positive | 4274690 - 4275487 | 28888.2 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | FFG67_RS20540 | Not Available | Positive | 4275487 - 4276377 | 33067.3 |
| fe(3+)-hydroxamate abc transporter permease fhub | FFG67_RS20545 | Not Available | Positive | 4276374 - 4278356 | 70441.6 |
| glutamate-1-semialdehyde 2,1-aminomutase | FFG67_RS20550 | Not Available | Negative | 4278391 - 4279671 | 45342.7 |
| protein yadx | FFG67_RS20555 | Not Available | Positive | 4279837 - 4279884 | 1806.13 |
| h(+)/cl(-) exchange transporter clca | FFG67_RS20560 | Not Available | Positive | 4279896 - 4281317 | 50354.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





