Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-hept-4-ene-1,7-dioate hydratase | FFG67_RS19250 | Not Available | Negative | 4008285 - 4009088 | 29716.5 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | FFG67_RS19255 | Not Available | Negative | 4009156 - 4009536 | 14361.3 |
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | FFG67_RS19260 | Not Available | Negative | 4009546 - 4010397 | 32034.2 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | FFG67_RS19265 | Not Available | Negative | 4010399 - 4011865 | 53030.7 |
| 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase | FFG67_RS19270 | Not Available | Negative | 4011862 - 4013151 | 47026.8 |
| homoprotocatechuate degradation operon regulator hpar | FFG67_RS19275 | Not Available | Positive | 4013423 - 4013869 | 17255.8 |
| methyl-accepting chemotaxis protein | FFG67_RS19280 | Not Available | Positive | 4013988 - 4015652 | 59855.9 |
| mfs transporter | FFG67_RS19285 | Not Available | Negative | 4015701 - 4017062 | 49443.4 |
| gntr family transcriptional regulator | FFG67_RS19290 | Not Available | Negative | 4017277 - 4018191 | 35384.2 |
| l-galactonate oxidoreductase | FFG67_RS19295 | Not Available | Positive | 4018330 - 4019352 | 36450.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





