Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fumarate hydratase | FFG67_RS18150 | Not Available | Negative | 3779148 - 3780794 | 60078.7 |
| anaerobic c4-dicarboxylate transporter dcub | FFG67_RS18155 | Not Available | Negative | 3780872 - 3782212 | 47938.2 |
| two-component system response regulator dcur | FFG67_RS18160 | Not Available | Negative | 3782783 - 3783502 | 27489.9 |
| sensor histidine kinase | FFG67_RS18165 | Not Available | Negative | 3783499 - 3785130 | 60553.4 |
| 4fe-4s mono-cluster protein yjdi | FFG67_RS18170 | Not Available | Positive | 3785311 - 3785541 | 8622.41 |
| gnat family n-acetyltransferase | FFG67_RS18175 | Not Available | Positive | 3785553 - 3785825 | 10485.6 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | FFG67_RS18180 | Not Available | Positive | 3786052 - 3786348 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | FFG67_RS18185 | Not Available | Positive | 3786376 - 3786549 | 6555.44 |
| lysine--trna ligase | FFG67_RS18190 | Not Available | Negative | 3786668 - 3788185 | 57828.9 |
| dipeptide/tripeptide permease dtpc | FFG67_RS18195 | Not Available | Negative | 3788422 - 3789879 | 53043.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





