Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism transcriptional regulator phnf | FFG67_RS18050 | Not Available | Negative | 3755669 - 3756394 | 27623.1 |
| phosphonate abc transporter, permease protein phne | FFG67_RS18055 | Not Available | Negative | 3756415 - 3757194 | 28385.3 |
| phosphonate abc transporter substrate-binding protein | FFG67_RS18060 | Not Available | Negative | 3757300 - 3758316 | 37372.6 |
| phosphonate abc transporter atp-binding protein | FFG67_RS18065 | Not Available | Negative | 3758341 - 3759129 | 29395.3 |
| voc family metalloprotein yjdn | FFG67_RS18070 | Not Available | Negative | 3759262 - 3759705 | 16138.1 |
| zinc ribbon domain-containing protein yjdm | FFG67_RS18075 | Not Available | Negative | 3759865 - 3760200 | 12345.7 |
| clamp-binding protein crfc | FFG67_RS18080 | Not Available | Positive | 3760602 - 3762830 | 84172.5 |
| yjcz-like family protein | FFG67_RS18085 | Not Available | Positive | 3762827 - 3763705 | 32883.6 |
| glycine betaine/l-proline transporter prop | FFG67_RS18090 | Not Available | Positive | 3763969 - 3765471 | 54836.1 |
| lpxt activity modulator pmrr | FFG67_RS18095 | Not Available | Positive | 3765583 - 3765672 | 3449.23 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





