Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase subunit nrfd | FFG67_RS17900 | Not Available | Positive | 3725011 - 3725967 | 35102.5 |
| heme lyase ccmf/nrfe family subunit | FFG67_RS17905 | Not Available | Positive | 3725987 - 3727705 | 63613.2 |
| heme lyase nrfefg subunit nrff | FFG67_RS17910 | Not Available | Positive | 3727698 - 3728081 | 14543.0 |
| heme lyase nrfefg subunit nrfg | FFG67_RS17915 | Not Available | Positive | 3728078 - 3728674 | 22773.6 |
| glutamate/aspartate:proton symporter gltp | FFG67_RS17920 | Not Available | Positive | 3729016 - 3730329 | 47107.0 |
| sel1 family tpr-like repeat protein yjco | FFG67_RS17925 | Not Available | Negative | 3730407 - 3731096 | 25080.4 |
| formate dehydrogenase subunit alpha | FFG67_RS17930 | Not Available | Negative | 3731190 - 3733337 | 79228.1 |
| multidrug efflux transporter outer membrane subunit mdtp | FFG67_RS17935 | Not Available | Negative | 3733535 - 3735001 | 53437.3 |
| multidrug efflux transporter permease subunit mdto | FFG67_RS17940 | Not Available | Negative | 3734998 - 3737049 | 76228.3 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | FFG67_RS17945 | Not Available | Negative | 3737049 - 3738080 | 36908.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





