Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 3640599 - 3642140 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3642226 - 3642301 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3642495 - 3645398 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3645493 - 3645608 | Not Available |
| acetyltransferase | FFG67_RS17575 | Not Available | Negative | 3645726 - 3646169 | 16468.7 |
| homoserine o-acetyltransferase meta | FFG67_RS17580 | Not Available | Positive | 3646326 - 3647255 | 35701.2 |
| malate synthase a | FFG67_RS17585 | Not Available | Positive | 3647524 - 3649125 | 60321.0 |
| isocitrate lyase | FFG67_RS17590 | Not Available | Positive | 3649155 - 3650459 | 47524.1 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | FFG67_RS17595 | Not Available | Positive | 3650740 - 3652476 | 67674.3 |
| shet2/espl2 family type iii secretion system effector toxin | FFG67_RS17600 | Not Available | Negative | 3652445 - 3654019 | 60154.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





