Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | FFG67_RS17010 | Not Available | Negative | 3517515 - 3518774 | 47172.9 |
| rhamnulokinase | FFG67_RS17015 | Not Available | Negative | 3518771 - 3520240 | 54184.5 |
| hth-type transcriptional activator rhas | FFG67_RS17020 | Not Available | Positive | 3520528 - 3521364 | 32317.2 |
| hth-type transcriptional activator rhar | FFG67_RS17025 | Not Available | Positive | 3521438 - 3522286 | 32315.3 |
| l-rhamnose/proton symporter rhat | FFG67_RS17030 | Not Available | Negative | 3522283 - 3523317 | 37271.0 |
| hypothetical protein | FFG67_RS17035 | Not Available | Positive | 3523572 - 3523745 | 6766.02 |
| is110-like element is621 family transposase | FFG67_RS17040 | Not Available | Positive | 3523896 - 3524876 | 36515.1 |
| hypothetical protein | FFG67_RS17045 | Not Available | Positive | 3524971 - 3525501 | 19481.0 |
| 2-keto-3-deoxygluconate transporter | FFG67_RS17050 | Not Available | Positive | 3525761 - 3526744 | 33671.4 |
| 6-hydroxyaminopurine reductase | FFG67_RS17055 | Not Available | Positive | 3526893 - 3527567 | 25344.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





