Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate trap transporter substrate-binding protein yiao | FFG67_RS15220 | Not Available | Positive | 3141691 - 3142677 | 36003.1 |
| l-xylulokinase | FFG67_RS15225 | Not Available | Positive | 3142681 - 3144177 | 55243.1 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | FFG67_RS15230 | Not Available | Positive | 3144174 - 3144836 | 23446.1 |
| l-ribulose-5-phosphate 3-epimerase | FFG67_RS15235 | Not Available | Positive | 3144829 - 3145689 | 32426.9 |
| l-ribulose-5-phosphate 4-epimerase | FFG67_RS15240 | Not Available | Positive | 3145683 - 3146378 | 25577.3 |
| hypothetical protein | FFG67_RS15245 | Not Available | Negative | 3146410 - 3146511 | 4038.79 |
| hypothetical protein | FFG67_RS26450 | Not Available | Positive | 3146515 - 3146703 | 7103.24 |
| mipa/ompv family protein | FFG67_RS15250 | Not Available | Negative | 3146725 - 3147465 | 27344.8 |
| lysr family transcriptional regulator | FFG67_RS15255 | Not Available | Positive | 3147589 - 3148563 | 37285.5 |
| hlyd family secretion protein | FFG67_RS15260 | Not Available | Negative | 3148560 - 3149696 | 41773.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





